Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Gm13597-201ENSMUST00000121239 375 ntBASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Gm11764-201ENSMUST00000120221 623 ntBASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp4cQ9D7F7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.46■□□□□ 0.39
Chmp4cQ9D7F7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chmp4cQ9D7F7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chmp4cQ9D7F7 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4cQ9D7F7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms