Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Gm6623-201ENSMUST00000173570 544 ntBASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a3Q9D554 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a3Q9D554 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Gm19164-201ENSMUST00000210667 640 ntBASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a3Q9D554 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sf3a3Q9D554 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a3Q9D554 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms