Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Gm2810-201ENSMUST00000118681 990 ntBASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.97□□□□□ -0.01
Vps28Q9D1C8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps28Q9D1C8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.96□□□□□ -0.01
Vps28Q9D1C8 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.96□□□□□ -0.02
Vps28Q9D1C8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Vps28Q9D1C8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.96□□□□□ -0.02
Vps28Q9D1C8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.96□□□□□ -0.02
Vps28Q9D1C8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Gm24158-201ENSMUST00000175263 71 ntBASIC14.95□□□□□ -0.02
Vps28Q9D1C8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Gm38225-201ENSMUST00000194001 393 ntBASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps28Q9D1C8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms