Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Gm15920-201ENSMUST00000118998 402 ntBASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Gm15483-201ENSMUST00000120338 456 ntBASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ssbp3Q9D032 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Gm25287-201ENSMUST00000103846 110 ntBASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Gm22918-201ENSMUST00000103855 110 ntBASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Gm2810-201ENSMUST00000118681 990 ntBASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Gm38225-201ENSMUST00000194001 393 ntBASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Gm10253-201ENSMUST00000194270 940 ntBASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Gm7774-201ENSMUST00000200064 533 ntBASIC12.17□□□□□ -0.46
Ssbp3Q9D032 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Ssbp3Q9D032 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm22065-201ENSMUST00000103753 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm22066-201ENSMUST00000103761 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm24932-201ENSMUST00000103763 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm24115-201ENSMUST00000103799 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm22190-201ENSMUST00000103827 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm22191-201ENSMUST00000103831 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm24721-201ENSMUST00000103849 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm28018-201ENSMUST00000103869 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm26399-201ENSMUST00000103937 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm13616-201ENSMUST00000120600 222 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm25349-201ENSMUST00000177728 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm23616-201ENSMUST00000177797 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm25871-201ENSMUST00000177816 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm24752-201ENSMUST00000178240 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm24496-201ENSMUST00000178287 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm25649-201ENSMUST00000178476 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm25548-201ENSMUST00000178681 110 ntBASIC12.16□□□□□ -0.46
Ssbp3Q9D032 Gm23147-201ENSMUST00000178841 110 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms