Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nde1Q9CZA6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nde1Q9CZA6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Gm18622-201ENSMUST00000219361 595 ntBASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nde1Q9CZA6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.26□□□□□ -0.13
Nde1Q9CZA6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nde1Q9CZA6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nde1Q9CZA6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms