Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim13Q9CYB0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Gm15372-201ENSMUST00000120729 834 ntBASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Gm10499-201ENSMUST00000174094 934 ntBASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim13Q9CYB0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Gm8097-201ENSMUST00000117903 829 ntBASIC13.5□□□□□ -0.25
Trim13Q9CYB0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim13Q9CYB0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms