Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Gm25016-201ENSMUST00000158399 131 ntBASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd1lQ9CXF7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd1lQ9CXF7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Mir6982-201ENSMUST00000184354 68 ntBASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Gm6296-201ENSMUST00000222599 943 ntBASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd1lQ9CXF7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Grk6-205ENSMUST00000224653 2976 ntBASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd1lQ9CXF7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms