Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Gm9726-201ENSMUST00000180321 678 ntBASIC17.19■□□□□ 0.34
Smc3Q9CW03 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Smc3Q9CW03 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.18■□□□□ 0.34
Smc3Q9CW03 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Mir8098-201ENSMUST00000184011 137 ntBASIC17.18■□□□□ 0.34
Smc3Q9CW03 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Gm5864-201ENSMUST00000202263 970 ntBASIC17.18■□□□□ 0.34
Smc3Q9CW03 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.18■□□□□ 0.34
Smc3Q9CW03 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.18■□□□□ 0.34
Smc3Q9CW03 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smc3Q9CW03 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Gm8749-201ENSMUST00000117737 331 ntBASIC17.17■□□□□ 0.34
Smc3Q9CW03 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.17■□□□□ 0.34
Smc3Q9CW03 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.17■□□□□ 0.34
Smc3Q9CW03 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.17■□□□□ 0.34
Smc3Q9CW03 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Gm10819-201ENSMUST00000099988 561 ntBASIC17.17■□□□□ 0.34
Smc3Q9CW03 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smc3Q9CW03 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Gm13464-201ENSMUST00000119418 935 ntBASIC17.16■□□□□ 0.34
Smc3Q9CW03 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.16■□□□□ 0.34
Smc3Q9CW03 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.16■□□□□ 0.34
Smc3Q9CW03 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc3Q9CW03 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Smc3Q9CW03 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms