Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Gm18959-201ENSMUST00000208954 655 ntBASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Rubie-203ENSMUST00000227803 2430 ntBASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTRAFQ9CQE8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Gm45058-201ENSMUST00000205810 766 ntBASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Gm21559-201ENSMUST00000220638 855 ntBASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Gm8587-201ENSMUST00000076538 843 ntBASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTRAFQ9CQE8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Gm27011-201ENSMUST00000182352 972 ntBASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RTRAFQ9CQE8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms