Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.51□□□□□ -0.09
Trim33Q99PP7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.51□□□□□ -0.09
Trim33Q99PP7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Gm15427-201ENSMUST00000117288 531 ntBASIC14.5□□□□□ -0.09
Trim33Q99PP7 Gm9385-201ENSMUST00000117563 472 ntBASIC14.5□□□□□ -0.09
Trim33Q99PP7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.5□□□□□ -0.09
Trim33Q99PP7 Gm11594-201ENSMUST00000122313 162 ntBASIC14.5□□□□□ -0.09
Trim33Q99PP7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.5□□□□□ -0.09
Trim33Q99PP7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trim33Q99PP7 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.49□□□□□ -0.09
Trim33Q99PP7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.49□□□□□ -0.09
Trim33Q99PP7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Gm25911-201ENSMUST00000157621 56 ntBASIC14.49□□□□□ -0.09
Trim33Q99PP7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim33Q99PP7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.48□□□□□ -0.09
Trim33Q99PP7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim33Q99PP7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms