Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Gm8602-201ENSMUST00000184045 607 ntBASIC17.12■□□□□ 0.33
Hdac9Q99N13 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.12■□□□□ 0.33
Hdac9Q99N13 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.12■□□□□ 0.33
Hdac9Q99N13 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.12■□□□□ 0.33
Hdac9Q99N13 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hdac9Q99N13 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.11■□□□□ 0.33
Hdac9Q99N13 BC001981-202ENSMUST00000191393 1545 ntBASIC17.11■□□□□ 0.33
Hdac9Q99N13 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac9Q99N13 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.1■□□□□ 0.33
Hdac9Q99N13 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Hdac9Q99N13 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac9Q99N13 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.09■□□□□ 0.33
Hdac9Q99N13 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.09■□□□□ 0.33
Hdac9Q99N13 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac9Q99N13 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Hdac9Q99N13 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms