Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.11□□□□□ -0.15
Rab28Q99KL7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.1□□□□□ -0.15
Rab28Q99KL7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rab28Q99KL7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Gm13015-201ENSMUST00000118674 204 ntBASIC14.09□□□□□ -0.15
Rab28Q99KL7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.09□□□□□ -0.15
Rab28Q99KL7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rab28Q99KL7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rab28Q99KL7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rab28Q99KL7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rab28Q99KL7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rab28Q99KL7 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.08□□□□□ -0.15
Rab28Q99KL7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rab28Q99KL7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.08□□□□□ -0.16
Rab28Q99KL7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab28Q99KL7 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.08□□□□□ -0.16
Rab28Q99KL7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
Rab28Q99KL7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab28Q99KL7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms