Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdha9Q91Y11 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha9Q91Y11 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha9Q91Y11 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha9Q91Y11 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha9Q91Y11 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdha9Q91Y11 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm43474-201ENSMUST00000196415 774 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdha9Q91Y11 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdha9Q91Y11 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Gm26308-201ENSMUST00000157768 69 ntBASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdha9Q91Y11 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms