Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Mir5131-201ENSMUST00000175426 93 ntBASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb4Q91XZ6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Gm18195-201ENSMUST00000207604 706 ntBASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb4Q91XZ6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb4Q91XZ6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Gm27628-201ENSMUST00000184911 107 ntBASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb4Q91XZ6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb4Q91XZ6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms