Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Gm8000-201ENSMUST00000188378 592 ntBASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Psmb5-202ENSMUST00000227257 622 ntBASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhga11Q91XY8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Gm12008-201ENSMUST00000117791 755 ntBASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhga11Q91XY8 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Gm2272-201ENSMUST00000194903 582 ntBASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhga11Q91XY8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhga11Q91XY8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms