Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.67■□□□□ 0.26
Trex1Q91XB0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.67■□□□□ 0.26
Trex1Q91XB0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.67■□□□□ 0.26
Trex1Q91XB0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.66■□□□□ 0.26
Trex1Q91XB0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Gm21854-201ENSMUST00000179901 471 ntBASIC16.66■□□□□ 0.26
Trex1Q91XB0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.66■□□□□ 0.26
Trex1Q91XB0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trex1Q91XB0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.65■□□□□ 0.26
Trex1Q91XB0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Gm23984-201ENSMUST00000157139 203 ntBASIC16.65■□□□□ 0.26
Trex1Q91XB0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trex1Q91XB0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms