Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Gm37917-201ENSMUST00000194711 392 ntBASIC14.43□□□□□ -0.1
Vsx1Q91V10 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vsx1Q91V10 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.42□□□□□ -0.1
Vsx1Q91V10 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Gm17150-201ENSMUST00000165577 381 ntBASIC14.42□□□□□ -0.1
Vsx1Q91V10 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Gm9522-201ENSMUST00000182394 926 ntBASIC14.42□□□□□ -0.1
Vsx1Q91V10 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vsx1Q91V10 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.41□□□□□ -0.1
Vsx1Q91V10 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.41□□□□□ -0.1
Vsx1Q91V10 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.41□□□□□ -0.1
Vsx1Q91V10 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vsx1Q91V10 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.4□□□□□ -0.1
Vsx1Q91V10 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vsx1Q91V10 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms