Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Gm8396-201ENSMUST00000057361 823 ntBASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4aQ8VEJ9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4aQ8VEJ9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Gm27321-201ENSMUST00000185021 205 ntBASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4aQ8VEJ9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps4aQ8VEJ9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms