Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Gm27920-201ENSMUST00000183953 96 ntBASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ndc1Q8VCB1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Gm20949-201ENSMUST00000206478 952 ntBASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ndc1Q8VCB1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ndc1Q8VCB1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ndc1Q8VCB1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ndc1Q8VCB1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.77□□□□□ -0.2
Ndc1Q8VCB1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ndc1Q8VCB1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ndc1Q8VCB1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms