Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Olfr286-202ENSMUST00000205305 969 ntBASIC14.02□□□□□ -0.17
Lsm1Q8VC85 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm1Q8VC85 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lsm1Q8VC85 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lsm1Q8VC85 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14□□□□□ -0.17
Lsm1Q8VC85 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lsm1Q8VC85 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14□□□□□ -0.17
Lsm1Q8VC85 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Lsm1Q8VC85 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lsm1Q8VC85 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm1Q8VC85 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Gm16026-204ENSMUST00000162652 683 ntBASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm1Q8VC85 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms