Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nup35Q8R4R6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nup35Q8R4R6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nup35Q8R4R6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nup35Q8R4R6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms