Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdt1Q8R4E9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Gm16198-201ENSMUST00000118766 670 ntBASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdt1Q8R4E9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Gm2272-201ENSMUST00000194903 582 ntBASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdt1Q8R4E9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms