Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c5Q8R2T8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c5Q8R2T8 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.2■□□□□ 0.34
Gtf3c5Q8R2T8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c5Q8R2T8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Gm6736-201ENSMUST00000166583 948 ntBASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Paupar-201ENSMUST00000194826 3482 ntBASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.19■□□□□ 0.34
Gtf3c5Q8R2T8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gm25911-201ENSMUST00000157621 56 ntBASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 AC107453.4-201ENSMUST00000227068 1817 ntBASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Matn2-206ENSMUST00000228570 2798 ntBASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gtf3c5Q8R2T8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Gm11543-201ENSMUST00000120758 370 ntBASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gtf3c5Q8R2T8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms