Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vopp1Q8R1C3 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.31■□□□□ 0.04
Vopp1Q8R1C3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vopp1Q8R1C3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vopp1Q8R1C3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.31■□□□□ 0.04
Vopp1Q8R1C3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vopp1Q8R1C3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm12091-201ENSMUST00000146791 830 ntBASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm5354-201ENSMUST00000182417 973 ntBASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Mir6392-201ENSMUST00000184924 108 ntBASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm37714-201ENSMUST00000194742 342 ntBASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vopp1Q8R1C3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.29■□□□□ 0.04
Vopp1Q8R1C3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Mir7654-201ENSMUST00000185082 70 ntBASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vopp1Q8R1C3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms