Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.78□□□□□ -0.2
Clrn1Q8K445 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Rpph1-201ENSMUST00000175096 319 ntBASIC13.78□□□□□ -0.2
Clrn1Q8K445 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.78□□□□□ -0.2
Clrn1Q8K445 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.78□□□□□ -0.2
Clrn1Q8K445 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clrn1Q8K445 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clrn1Q8K445 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clrn1Q8K445 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clrn1Q8K445 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.77□□□□□ -0.21
Clrn1Q8K445 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Clrn1Q8K445 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clrn1Q8K445 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Clrn1Q8K445 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Gm8749-201ENSMUST00000117737 331 ntBASIC13.76□□□□□ -0.21
Clrn1Q8K445 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.76□□□□□ -0.21
Clrn1Q8K445 Gm11025-201ENSMUST00000140773 466 ntBASIC13.76□□□□□ -0.21
Clrn1Q8K445 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.76□□□□□ -0.21
Clrn1Q8K445 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.76□□□□□ -0.21
Clrn1Q8K445 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clrn1Q8K445 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clrn1Q8K445 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms