Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.2□□□□□ -0.94
Cystm1Q8K353 Gm44645-201ENSMUST00000205492 1653 ntBASIC9.2□□□□□ -0.94
Cystm1Q8K353 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 AC148324.1-201ENSMUST00000219034 4240 ntBASIC9.2□□□□□ -0.94
Cystm1Q8K353 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Gm27459-201ENSMUST00000184860 107 ntBASIC9.2□□□□□ -0.94
Cystm1Q8K353 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Gm34391-201ENSMUST00000203706 907 ntBASIC9.2□□□□□ -0.94
Cystm1Q8K353 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Zkscan4-202ENSMUST00000225845 1506 ntBASIC9.2□□□□□ -0.94
Cystm1Q8K353 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC9.19□□□□□ -0.94
Cystm1Q8K353 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Mir8098-201ENSMUST00000184011 137 ntBASIC9.19□□□□□ -0.94
Cystm1Q8K353 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.19□□□□□ -0.94
Cystm1Q8K353 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Pck2-205ENSMUST00000226352 2784 ntBASIC9.19□□□□□ -0.94
Cystm1Q8K353 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC9.19□□□□□ -0.94
Cystm1Q8K353 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Cystm1Q8K353 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms