Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Rpph1-201ENSMUST00000175096 319 ntBASIC14.92□□□□□ -0.02
CopaQ8CIE6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Gm44335-201ENSMUST00000196879 141 ntBASIC14.91□□□□□ -0.02
CopaQ8CIE6 Gm44297-201ENSMUST00000198304 141 ntBASIC14.91□□□□□ -0.02
CopaQ8CIE6 Gm44346-201ENSMUST00000198851 141 ntBASIC14.91□□□□□ -0.02
CopaQ8CIE6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.91□□□□□ -0.02
CopaQ8CIE6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CopaQ8CIE6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.9□□□□□ -0.02
CopaQ8CIE6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Gm10576-201ENSMUST00000191927 825 ntBASIC14.9□□□□□ -0.02
CopaQ8CIE6 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.9□□□□□ -0.02
CopaQ8CIE6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.9□□□□□ -0.02
CopaQ8CIE6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.9□□□□□ -0.02
CopaQ8CIE6 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CopaQ8CIE6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.89□□□□□ -0.03
CopaQ8CIE6 Gm2272-201ENSMUST00000194903 582 ntBASIC14.89□□□□□ -0.03
CopaQ8CIE6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.89□□□□□ -0.03
CopaQ8CIE6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.89□□□□□ -0.03
CopaQ8CIE6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms