Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.06■□□□□ 0.48
Smc5Q8CG46 Gm21362-201ENSMUST00000194272 928 ntBASIC18.06■□□□□ 0.48
Smc5Q8CG46 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Gm37691-201ENSMUST00000192147 2573 ntBASIC18.06■□□□□ 0.48
Smc5Q8CG46 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc5Q8CG46 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.05■□□□□ 0.48
Smc5Q8CG46 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Gm27628-201ENSMUST00000184911 107 ntBASIC18.05■□□□□ 0.48
Smc5Q8CG46 Gm37230-201ENSMUST00000194491 818 ntBASIC18.05■□□□□ 0.48
Smc5Q8CG46 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.05■□□□□ 0.48
Smc5Q8CG46 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.05■□□□□ 0.48
Smc5Q8CG46 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc5Q8CG46 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Matn2-206ENSMUST00000228570 2798 ntBASIC18.04■□□□□ 0.48
Smc5Q8CG46 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.04■□□□□ 0.48
Smc5Q8CG46 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC18.04■□□□□ 0.48
Smc5Q8CG46 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Gm16198-201ENSMUST00000118766 670 ntBASIC18.04■□□□□ 0.48
Smc5Q8CG46 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.04■□□□□ 0.48
Smc5Q8CG46 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.04■□□□□ 0.48
Smc5Q8CG46 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Smc5Q8CG46 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.03■□□□□ 0.48
Smc5Q8CG46 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc5Q8CG46 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.03■□□□□ 0.48
Smc5Q8CG46 Mmp14-206ENSMUST00000225641 3238 ntBASIC18.03■□□□□ 0.48
Smc5Q8CG46 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.03■□□□□ 0.48
Smc5Q8CG46 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms