Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc28bQ8CEG5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc28bQ8CEG5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.43□□□□□ -0.1
Ccdc28bQ8CEG5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28bQ8CEG5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28bQ8CEG5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms