Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.71■□□□□ 0.1
Vcpip1Q8CDG3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vcpip1Q8CDG3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vcpip1Q8CDG3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Gm23935-201ENSMUST00000102303 57 ntBASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Gm24270-201ENSMUST00000102326 57 ntBASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Gm24245-201ENSMUST00000157318 57 ntBASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Gm27397-201ENSMUST00000184997 107 ntBASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Gm2272-201ENSMUST00000194903 582 ntBASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vcpip1Q8CDG3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms