Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tsen54Q8C2A2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tsen54Q8C2A2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Mir6404-201ENSMUST00000183699 94 ntBASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tsen54Q8C2A2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tsen54Q8C2A2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Tsen54Q8C2A2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tsen54Q8C2A2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tsen54Q8C2A2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tsen54Q8C2A2 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.22□□□□□ -0.45
Tsen54Q8C2A2 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.22□□□□□ -0.45
Tsen54Q8C2A2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Tsen54Q8C2A2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms