Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cps1Q8C196 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Gm16342-201ENSMUST00000124025 1025 ntBASIC19.31■□□□□ 0.68
Cps1Q8C196 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Gm43179-201ENSMUST00000198797 275 ntBASIC19.31■□□□□ 0.68
Cps1Q8C196 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Gm11661-201ENSMUST00000121761 1327 ntBASIC19.31■□□□□ 0.68
Cps1Q8C196 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cps1Q8C196 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.31■□□□□ 0.68
Cps1Q8C196 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Gm24420-201ENSMUST00000176676 59 ntBASIC19.3■□□□□ 0.68
Cps1Q8C196 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Gm9299-201ENSMUST00000206392 1140 ntBASIC19.3■□□□□ 0.68
Cps1Q8C196 Gm18054-201ENSMUST00000207539 555 ntBASIC19.3■□□□□ 0.68
Cps1Q8C196 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 AC126253.1-201ENSMUST00000227974 824 ntBASIC19.3■□□□□ 0.68
Cps1Q8C196 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Trav4d-2-201ENSMUST00000120914 335 ntBASIC19.3■□□□□ 0.68
Cps1Q8C196 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC19.3■□□□□ 0.68
Cps1Q8C196 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cps1Q8C196 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.3■□□□□ 0.68
Cps1Q8C196 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cps1Q8C196 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.29■□□□□ 0.68
Cps1Q8C196 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
Cps1Q8C196 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cps1Q8C196 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.29■□□□□ 0.68
Cps1Q8C196 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cps1Q8C196 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC19.29■□□□□ 0.68
Cps1Q8C196 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cps1Q8C196 Proscos-202ENSMUST00000178990 666 ntBASIC19.29■□□□□ 0.68
Cps1Q8C196 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cps1Q8C196 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC19.29■□□□□ 0.68
Cps1Q8C196 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC19.29■□□□□ 0.68
Cps1Q8C196 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.28■□□□□ 0.68
Cps1Q8C196 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC19.28■□□□□ 0.68
Cps1Q8C196 Gm7553-201ENSMUST00000185805 1426 ntBASIC19.28■□□□□ 0.68
Cps1Q8C196 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC19.28■□□□□ 0.68
Cps1Q8C196 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cps1Q8C196 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cps1Q8C196 Gm42853-201ENSMUST00000201273 1387 ntBASIC19.27■□□□□ 0.68
Cps1Q8C196 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cps1Q8C196 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cps1Q8C196 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cps1Q8C196 Gm11557-201ENSMUST00000120200 1008 ntBASIC19.27■□□□□ 0.68
Cps1Q8C196 Gm14730-201ENSMUST00000122378 1045 ntBASIC19.27■□□□□ 0.68
Cps1Q8C196 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cps1Q8C196 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cps1Q8C196 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms