Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Gm15590-201ENSMUST00000078419 552 ntBASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpne3Q8BT60 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Gm13036-201ENSMUST00000117799 748 ntBASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cpne3Q8BT60 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Mir5131-201ENSMUST00000175426 93 ntBASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne3Q8BT60 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cpne3Q8BT60 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms