Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Gm15173-201ENSMUST00000122049 433 ntBASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Gm7230-201ENSMUST00000173026 815 ntBASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Gm9726-201ENSMUST00000180321 678 ntBASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Gm6376-201ENSMUST00000209407 580 ntBASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdhr3Q8BL00 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gm8749-201ENSMUST00000117737 331 ntBASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gm4899-201ENSMUST00000178708 719 ntBASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gm6550-201ENSMUST00000187574 993 ntBASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdhr3Q8BL00 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdhr3Q8BL00 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdhr3Q8BL00 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms