Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.75□□□□□ -0.21
Clrn3Q8BHH8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Clrn3Q8BHH8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Clrn3Q8BHH8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Thap2-203ENSMUST00000218989 527 ntBASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms