Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh19Q80TF3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Gm8749-201ENSMUST00000117737 331 ntBASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Gm18766-201ENSMUST00000189811 808 ntBASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdh19Q80TF3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm13453-201ENSMUST00000118708 357 ntBASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm27618-201ENSMUST00000183671 60 ntBASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm7063-201ENSMUST00000186840 981 ntBASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm29541-201ENSMUST00000191351 678 ntBASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm42790-201ENSMUST00000201268 969 ntBASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh19Q80TF3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdh19Q80TF3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms