Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Gm27533-201ENSMUST00000183800 152 ntBASIC13.49□□□□□ -0.25
Pif1Q80SX8 Gm43767-201ENSMUST00000198933 381 ntBASIC13.49□□□□□ -0.25
Pif1Q80SX8 Gm44344-201ENSMUST00000200287 129 ntBASIC13.49□□□□□ -0.25
Pif1Q80SX8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pif1Q80SX8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.48□□□□□ -0.25
Pif1Q80SX8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.48□□□□□ -0.25
Pif1Q80SX8 Gm16215-201ENSMUST00000161990 637 ntBASIC13.48□□□□□ -0.25
Pif1Q80SX8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.48□□□□□ -0.25
Pif1Q80SX8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pif1Q80SX8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Syt7-205ENSMUST00000224135 1557 ntBASIC13.47□□□□□ -0.25
Pif1Q80SX8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Gm7488-201ENSMUST00000117148 684 ntBASIC13.47□□□□□ -0.25
Pif1Q80SX8 Gm14719-201ENSMUST00000121891 340 ntBASIC13.47□□□□□ -0.25
Pif1Q80SX8 Gm15487-201ENSMUST00000122373 465 ntBASIC13.47□□□□□ -0.25
Pif1Q80SX8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Gm44855-201ENSMUST00000205725 362 ntBASIC13.47□□□□□ -0.25
Pif1Q80SX8 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.47□□□□□ -0.25
Pif1Q80SX8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Celf4-206ENSMUST00000224553 1729 ntBASIC13.47□□□□□ -0.25
Pif1Q80SX8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pif1Q80SX8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.46□□□□□ -0.25
Pif1Q80SX8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Gm27680-201ENSMUST00000184192 160 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms