Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Efs-202ENSMUST00000227037 2540 ntBASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh8Q7TSK3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Gm17837-201ENSMUST00000186435 985 ntBASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh8Q7TSK3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Gm27321-201ENSMUST00000185021 205 ntBASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh8Q7TSK3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms