Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.27□□□□□ -0.44
Rif1Q6PR54 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rif1Q6PR54 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rif1Q6PR54 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rif1Q6PR54 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rif1Q6PR54 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Gm3508-201ENSMUST00000186012 792 ntBASIC12.27□□□□□ -0.45
Rif1Q6PR54 Gm43818-201ENSMUST00000200605 466 ntBASIC12.27□□□□□ -0.45
Rif1Q6PR54 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.27□□□□□ -0.45
Rif1Q6PR54 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Gm19309-201ENSMUST00000218295 205 ntBASIC12.27□□□□□ -0.45
Rif1Q6PR54 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.27□□□□□ -0.45
Rif1Q6PR54 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rif1Q6PR54 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.26□□□□□ -0.45
Rif1Q6PR54 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.26□□□□□ -0.45
Rif1Q6PR54 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.26□□□□□ -0.45
Rif1Q6PR54 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.26□□□□□ -0.45
Rif1Q6PR54 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Gm6334-201ENSMUST00000207083 228 ntBASIC12.26□□□□□ -0.45
Rif1Q6PR54 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rif1Q6PR54 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Gm6222-201ENSMUST00000120787 396 ntBASIC12.25□□□□□ -0.45
Rif1Q6PR54 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Gm24644-201ENSMUST00000157114 139 ntBASIC12.25□□□□□ -0.45
Rif1Q6PR54 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rif1Q6PR54 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms