Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scube3Q66PY1 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.35■□□□□ 0.05
Scube3Q66PY1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.35■□□□□ 0.05
Scube3Q66PY1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Gm25287-201ENSMUST00000103846 110 ntBASIC15.35■□□□□ 0.05
Scube3Q66PY1 Gm22918-201ENSMUST00000103855 110 ntBASIC15.35■□□□□ 0.05
Scube3Q66PY1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Scube3Q66PY1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scube3Q66PY1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm22065-201ENSMUST00000103753 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm22066-201ENSMUST00000103761 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm24932-201ENSMUST00000103763 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm24115-201ENSMUST00000103799 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm22190-201ENSMUST00000103827 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm22191-201ENSMUST00000103831 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm24721-201ENSMUST00000103849 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm28018-201ENSMUST00000103869 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm26399-201ENSMUST00000103937 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm25349-201ENSMUST00000177728 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm23616-201ENSMUST00000177797 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm25871-201ENSMUST00000177816 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm24752-201ENSMUST00000178240 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm24496-201ENSMUST00000178287 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm25649-201ENSMUST00000178476 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm25548-201ENSMUST00000178681 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm23147-201ENSMUST00000178841 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm26095-201ENSMUST00000179270 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm22171-201ENSMUST00000179283 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm23936-201ENSMUST00000179354 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm22619-201ENSMUST00000179516 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm25255-201ENSMUST00000179579 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm24755-201ENSMUST00000179691 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm26506-201ENSMUST00000179692 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm25086-201ENSMUST00000179931 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm23243-201ENSMUST00000180047 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm24659-201ENSMUST00000180212 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm24169-201ENSMUST00000180244 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm23689-201ENSMUST00000180354 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm27359-201ENSMUST00000184153 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm27785-201ENSMUST00000184268 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm27466-201ENSMUST00000184396 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm27703-201ENSMUST00000184836 110 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm45878-201ENSMUST00000211839 241 ntBASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scube3Q66PY1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms