Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.91■□□□□ 0.3
Scn9aQ62205 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm38241-201ENSMUST00000192641 898 ntBASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scn9aQ62205 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn9aQ62205 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn9aQ62205 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Scn9aQ62205 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn9aQ62205 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Gm18905-201ENSMUST00000205454 928 ntBASIC16.9■□□□□ 0.3
Scn9aQ62205 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn9aQ62205 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn9aQ62205 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scn9aQ62205 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn9aQ62205 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn9aQ62205 Gm11803-201ENSMUST00000119966 444 ntBASIC16.89■□□□□ 0.3
Scn9aQ62205 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.89■□□□□ 0.3
Scn9aQ62205 Gm43094-201ENSMUST00000196549 921 ntBASIC16.89■□□□□ 0.3
Scn9aQ62205 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Scn9aQ62205 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn9aQ62205 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scn9aQ62205 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Scn9aQ62205 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Scn9aQ62205 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Scn9aQ62205 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.89■□□□□ 0.29
Scn9aQ62205 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn9aQ62205 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn9aQ62205 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Scn9aQ62205 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn9aQ62205 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Scn9aQ62205 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.88■□□□□ 0.29
Scn9aQ62205 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.88■□□□□ 0.29
Scn9aQ62205 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn9aQ62205 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.88■□□□□ 0.29
Scn9aQ62205 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.88■□□□□ 0.29
Scn9aQ62205 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scn9aQ62205 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn9aQ62205 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn9aQ62205 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scn9aQ62205 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms