Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox17Q61473 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox17Q61473 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox17Q61473 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.72□□□□□ -0.21
Sox17Q61473 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox17Q61473 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.72□□□□□ -0.21
Sox17Q61473 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sox17Q61473 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sox17Q61473 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Sox17Q61473 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox17Q61473 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
Sox17Q61473 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sox17Q61473 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Sox17Q61473 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sox17Q61473 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox17Q61473 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox17Q61473 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox17Q61473 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sox17Q61473 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox17Q61473 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Sox17Q61473 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox17Q61473 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox17Q61473 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Sox17Q61473 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.71□□□□□ -0.22
Sox17Q61473 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Sox17Q61473 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Sox17Q61473 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox17Q61473 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.7□□□□□ -0.22
Sox17Q61473 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sox17Q61473 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.7□□□□□ -0.22
Sox17Q61473 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.7□□□□□ -0.22
Sox17Q61473 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sox17Q61473 Gm6296-201ENSMUST00000222599 943 ntBASIC13.7□□□□□ -0.22
Sox17Q61473 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Sox17Q61473 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Sox17Q61473 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.7□□□□□ -0.22
Sox17Q61473 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox17Q61473 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.69□□□□□ -0.22
Sox17Q61473 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox17Q61473 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sox17Q61473 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms