Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zic4Q61467 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.82□□□□□ -0.52
Zic4Q61467 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Zic4Q61467 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.82□□□□□ -0.52
Zic4Q61467 Gm6296-201ENSMUST00000222599 943 ntBASIC11.82□□□□□ -0.52
Zic4Q61467 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Zic4Q61467 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zic4Q61467 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zic4Q61467 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.81□□□□□ -0.52
Zic4Q61467 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.81□□□□□ -0.52
Zic4Q61467 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Zic4Q61467 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zic4Q61467 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zic4Q61467 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zic4Q61467 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Gm27742-201ENSMUST00000184667 60 ntBASIC11.81□□□□□ -0.52
Zic4Q61467 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.81□□□□□ -0.52
Zic4Q61467 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Zic4Q61467 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.81□□□□□ -0.52
Zic4Q61467 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zic4Q61467 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Zic4Q61467 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Zic4Q61467 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.8□□□□□ -0.52
Zic4Q61467 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.8□□□□□ -0.52
Zic4Q61467 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Zic4Q61467 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.8□□□□□ -0.52
Zic4Q61467 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.8□□□□□ -0.52
Zic4Q61467 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.8□□□□□ -0.52
Zic4Q61467 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.8□□□□□ -0.52
Zic4Q61467 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zic4Q61467 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Zic4Q61467 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms