Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxd3Q61060 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Foxd3Q61060 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxd3Q61060 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxd3Q61060 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.44□□□□□ -0.26
Foxd3Q61060 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Foxd3Q61060 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Foxd3Q61060 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxd3Q61060 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxd3Q61060 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Foxd3Q61060 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Foxd3Q61060 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Gm26308-201ENSMUST00000157768 69 ntBASIC13.43□□□□□ -0.26
Foxd3Q61060 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Gm27321-201ENSMUST00000185021 205 ntBASIC13.43□□□□□ -0.26
Foxd3Q61060 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.43□□□□□ -0.26
Foxd3Q61060 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Foxd3Q61060 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Foxd3Q61060 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Gm7222-201ENSMUST00000117512 906 ntBASIC13.42□□□□□ -0.26
Foxd3Q61060 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.42□□□□□ -0.26
Foxd3Q61060 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.42□□□□□ -0.26
Foxd3Q61060 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Gm7787-201ENSMUST00000216858 688 ntBASIC13.42□□□□□ -0.26
Foxd3Q61060 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.42□□□□□ -0.26
Foxd3Q61060 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd3Q61060 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.41□□□□□ -0.26
Foxd3Q61060 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Foxd3Q61060 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Foxd3Q61060 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd3Q61060 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms