Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NfkbibQ60778 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.51■□□□□ 0.39
NfkbibQ60778 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
NfkbibQ60778 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.51■□□□□ 0.39
NfkbibQ60778 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NfkbibQ60778 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NfkbibQ60778 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NfkbibQ60778 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NfkbibQ60778 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.5■□□□□ 0.39
NfkbibQ60778 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Gm7775-201ENSMUST00000218871 853 ntBASIC17.5■□□□□ 0.39
NfkbibQ60778 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NfkbibQ60778 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NfkbibQ60778 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.49■□□□□ 0.39
NfkbibQ60778 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NfkbibQ60778 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.49■□□□□ 0.39
NfkbibQ60778 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
NfkbibQ60778 Gm15653-201ENSMUST00000119247 907 ntBASIC17.49■□□□□ 0.39
NfkbibQ60778 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.49■□□□□ 0.39
NfkbibQ60778 Gm27989-201ENSMUST00000184721 107 ntBASIC17.49■□□□□ 0.39
NfkbibQ60778 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.49■□□□□ 0.39
NfkbibQ60778 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.49■□□□□ 0.39
NfkbibQ60778 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.49■□□□□ 0.39
NfkbibQ60778 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NfkbibQ60778 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.48■□□□□ 0.39
NfkbibQ60778 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
NfkbibQ60778 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NfkbibQ60778 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Gm12882-201ENSMUST00000121696 517 ntBASIC17.48■□□□□ 0.39
NfkbibQ60778 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NfkbibQ60778 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.48■□□□□ 0.39
NfkbibQ60778 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NfkbibQ60778 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.48■□□□□ 0.39
NfkbibQ60778 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NfkbibQ60778 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NfkbibQ60778 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NfkbibQ60778 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 Gm12151-201ENSMUST00000121374 290 ntBASIC17.47■□□□□ 0.39
NfkbibQ60778 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.47■□□□□ 0.39
NfkbibQ60778 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NfkbibQ60778 Mir125a-201ENSMUST00000083545 68 ntBASIC17.47■□□□□ 0.39
NfkbibQ60778 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NfkbibQ60778 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
NfkbibQ60778 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NfkbibQ60778 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms