Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1h4Q60641 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.92□□□□□ -0.18
Nr1h4Q60641 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.92□□□□□ -0.18
Nr1h4Q60641 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1h4Q60641 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.91□□□□□ -0.18
Nr1h4Q60641 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.91□□□□□ -0.18
Nr1h4Q60641 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Gm6089-201ENSMUST00000197666 938 ntBASIC13.91□□□□□ -0.18
Nr1h4Q60641 Gm7787-201ENSMUST00000216858 688 ntBASIC13.91□□□□□ -0.18
Nr1h4Q60641 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.91□□□□□ -0.18
Nr1h4Q60641 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms