Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm12859-201ENSMUST00000117834 427 ntBASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-2Q5R1I4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 AA619741-201ENSMUST00000195095 646 ntBASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Gm43703-201ENSMUST00000200523 763 ntBASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-2Q5R1I4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Mir125a-201ENSMUST00000083545 68 ntBASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-2Q5R1I4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav6-2Q5R1I4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-2Q5R1I4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-2Q5R1I4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-2Q5R1I4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-2Q5R1I4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms