Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Gm8655-201ENSMUST00000221159 852 ntBASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav8d-1Q5R1H8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gm18195-201ENSMUST00000207604 706 ntBASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav8d-1Q5R1H8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8d-1Q5R1H8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav8d-1Q5R1H8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8d-1Q5R1H8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8d-1Q5R1H8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8d-1Q5R1H8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8d-1Q5R1H8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8d-1Q5R1H8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms