Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-3Q5R1C3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Gm18959-201ENSMUST00000208954 655 ntBASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav3-3Q5R1C3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav3-3Q5R1C3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms