Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Mir8102-201ENSMUST00000184148 139 ntBASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Gm16476-201ENSMUST00000221544 139 ntBASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rc3h1Q4VGL6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rc3h1Q4VGL6 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.83■□□□□ 0.29
Rc3h1Q4VGL6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rc3h1Q4VGL6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rc3h1Q4VGL6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Rc3h1Q4VGL6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Mir7684-201ENSMUST00000183858 60 ntBASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Gm45453-201ENSMUST00000211758 853 ntBASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rc3h1Q4VGL6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms